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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs61854863 chr1:247294673 C/T 0 399 15.33 15.37 3.2 KM Plot
LGG rs61855300 chr10:89930935 G/A 6.72E-5 404 14.78 18.72 5.52 KM Plot
LGG rs61855301 chr10:89944319 C/A 6.9E-5 402 14.78 18.72 5.52 KM Plot
LGG rs61855302 chr10:89950696 C/T 4.07E-5 402 14.77 18.97 5.52 KM Plot
LGG rs61855354 chr10:89971611 A/G 2.46E-6 406 14.77 18.72 8.97 KM Plot
LGG rs61872763 chr10:122682384 A/G 9.9E-5 401 16.3 14.7 17.97 KM Plot
LGG rs61936569 chr12:102301294 G/A 0.000155 406 14.6 18.27 13.15 KM Plot
LGG rs61936570 chr12:102301360 T/C 0.000169 403 14.57 18.27 13.15 KM Plot
LGG rs61936572 chr12:102301874 A/G 9.87E-5 401 14.53 18.72 13.15 KM Plot
LGG rs61936573 chr12:102301898 G/C 0.000101 400 14.57 18.72 13.15 KM Plot
LGG rs61936574 chr12:102301910 T/C 0.000101 400 14.57 18.72 13.15 KM Plot
LGG rs61936575 chr12:102301915 T/C 0.000118 400 14.5 18.65 13.15 KM Plot
LGG rs61936577 chr12:102303062 A/G 6.59E-5 399 14.53 18.72 13.15 KM Plot
LGG rs619376 chr18:44265900 T/C 1.97E-7 395 14.92 15.57 15.58 KM Plot
LGG rs61938214 chr12:102239841 C/T 2.34E-6 396 14.43 19.87 13.15 KM Plot